High-throughput proximal ground crop phenotyping …
This study has comprehensively reviewed high-throughput proximal ground crop phenotyping systems in terms of hardware (e.g., sensors, platform types), software (e.g., ML/DL models), and system integration (e.g., phenotyping robotics) over the past two decades (2000–2024).
High-Throughput Field Plant Phenotyping: A Self …
High-throughput phenotyping enables large-scale collection of plant images and sensor data in greenhouses and fields [1–7].For example, side-view images can be taken of hundreds to thousands of crops in fields simultaneously and continuously throughout their growth period by placing cameras in front of each row of plants [].To utilize these rich …
A High-Throughput Phenotyping Pipeline for Image …
High-throughput phenotyping is a newly emerging technique in the plant science research. Many automated systems have been constructed both in the greenhouse and field to study plant features [ 1 – 3 ]). One of the main innovations is to use automated cameras to take raw images for plants.
High-throughput sequencing in plant disease management: …
High-throughput sequencing (HTS) has instigated a paradigm shift in plant pathology, showcasing its transformative role in the management of plant diseases. As a powerful tool, HTS aids in identifying pathogens and enhances disease management strategies by detecting novel and emerging pathogens, tracking disease outbreaks, and …
Bacterial and fungal diversities examined through high-throughput …
1. Introduction. Most heavy metals have long-term toxicological and other adverse effects on the environment and humans; thus, heavy-metal contamination has become a crucial environmental concern in numerous countries (Chen et al., 2018; Deng et al., 2018).Lead (Pb) is among the most common heavy-metal pollutants (Hou et al., …
High-throughput interspecies profiling of acidic plant …
Background Acidic phytohormones are small molecules controlling many physiological functions in plants. A comprehensive picture of their profiles including the active forms, precursors and metabolites provides an important insight into ongoing physiological processes and is essential for many biological studies performed on …
Optimizing 1D 1H-NMR profiling of plant samples for high throughput
Introduction: Proton nuclear magnetic resonance spectroscopy (1 H-NMR)-based metabolomic profiling has a range of applications in plant sciences. Objectives: The aim of the present work is to provide advice for minimizing uncontrolled variability in plant sample preparation before and during NMR metabolomic profiling, taking into account …
Microbial Composition in Bioaerosols of a High-Throughput …
Microbial counts demonstrated a similar pattern in the prevalence of the various microbiota throughout the various processing stages (Figure 2, panels A to H).There was a definite decline in the numbers from the receiving-killing area downstream toward the dispatch area, whereas the air-chilling area had the lowest microbial counts.
High Throughput In vivo Analysis of Plant Leaf Chemical …
The concern is that deficiency of multiple nutrients and their interdependence could lead to false correlations between the nutrients and spectral data. Pairwise correlation analysis ... Image Harvest: an open-source platform for high-throughput plant image processing and analysis. J. Exp. Bot. 67, 3587–3599. 10.1093/jxb/erw176 ...
Image Harvest: an open-source platform for high-throughput plant …
High-throughput plant phenotyping is an effective approach to bridge the genotype-to-phenotype gap in crops. Phenomics experiments typically result in large-scale image datasets, which are not amenable for processing on desktop computers, thus creating a bottleneck in the image-analysis pipeline.
Accurate inference of shoot biomass from high-throughput …
With the establishment of advanced technology facilities for high throughput plant phenotyping, the problem of estimating plant biomass of individual plants from their two dimensional images is becoming increasingly important. ... A schematic diagram of the image processing procedure is shown in Figure ... Functional Plant Biology. 2000; …
Imaging Technology for High-Throughput Plant Phenotyping
The HTPP systems in controlled environments can be used to capture plant responses to specific variables in a non-destructive, highly repeatable, and high-resolution manner, including structural, physiological, and biochemical traits of plant roots and shoots.
Origin and evolution of high throughput screening
Spencer RW. Diversity analysis in high throughput screening. J Biomol Screen. 1997; 2:69–70. [Google Scholar] Valler MJ, Green D. Diversity screening versus focused screening in drug discovery. Drug Discov Today. 2000; 5:286–293. [Google Scholar] Wikel JH, Higgs RE. Applications of molecular diversity analysis in high …
High-Throughput Phenotyping: A Platform to Accelerate …
Plant phenomics: High-throughput technology for accelerating genomics. Article 12 September 2020. Introduction. Increasing the productivity of major food and feed crops has always been a concern worldwide.
Pitfalls and potential of high-throughput plant phenotyping …
Automated high-throughput plant phenotyping (HTPP) enables non-invasive, fast and standardized evaluations of a large number of plants for size, development, and certain physiological variables. Many research groups recognize the potential of HTPP and have made significant investments in HTPP infrastructure, or are …
High-throughput plant phenotyping: a role for …
Considerable recent progress has been made in the development of large-scale, HTP (see Glossary) plant phenotyping facilities – now also for large crop plants [1, 2] (Figure 1, Key figure).The main characteristics of these facilities are advanced automation, combined sensing technologies, and high-end computing facilities to handle …
High-throughput cultivation and identification of …
microbiota patterns and to investigate molecular mechanisms underlying plant–microbiota interac-tions19.Our protocol can be modified to cultivate members of the bacterial microbiota from other
High-Throughput Plant Phenotyping Platform (HT3P) as a …
Fortunately, the high-throughput plant phenotyping platform (HT3P), employing advanced sensors and data collection systems, can take full advantage of non-destructive and high-throughput methods to monitor, quantify, and evaluate specific phenotypes for large-scale agricultural experiments, and it can effectively perform …
Unmanned aerial system‐based high‐throughput phenotyping for plant
The use of UAS for obtaining high-throughput phenotyping (HTP) data in plant breeding programs has gained popularity in recent years. The integrity and quality of the raw data are essential for ensuring the accuracy of predictive tools and proper interpretation of the data. ... These types of constraints in data collection capability often …
Plant Metabolomics: Current Initiatives and Future Prospects
It can lead to the identification of metabolites linked with specific traits or functions. Plant metabolic networks and pathways can be better understood with the help of metabolomics. Researchers can determine how plants react to environmental cues or genetic modifications by examining how metabolite profiles change under various crop …
Manufacturing Throughput: How to Improve it in 2024
A high throughput rate signifies a system finely calibrated to these principles, minimizing inventory and reducing the capital tied up in work-in-progress. The manufacturing throughput time includes the following: Processing time is the time involved in transforming raw materials into finished goods.
An Efficient Processing Approach for Colored Point Cloud-Based High
The analysis cascade can be implemented in future high-throughput phenotyping scenarios and will support the evaluation of the performance of different plant genotypes exposed to stress or in ...
Combining high-throughput phenotyping and genome …
Even as the study of plant genomics rapidly develops through the use of high-throughput sequencing techniques, traditional plant phenotyping lags far behind. Here we develop a high-throughput rice ...
Data Staging for Efficient High Throughput Stream Processing
Another noteworthy feature of the high throughput design is that only single-port memory rather than dual-port memory is required for processing continuous data streams. This results in 50% ...
High-Throughput Phenotyping: A Platform to Accelerate …
Development of high-throughput phenotyping technologies has progressed considerably in the last 10 years. These technologies provide precise measurements of desired traits among thousands of field-grown plants under diversified environments; this is a critical step towards selection of better performing lines as to yield, disease resistance, …
A High-Throughput Phenotyping Pipeline for Image Processing …
In order to extract the plant traits, segmentation for parts of a plant or the whole plant is necessary. Thresholding is the simplest and the most commonly used method for image segmentation [], which separates the image into foreground and background classes by a cut-off value on the pixel intensities.Based on the thresholding methods, several …
Integrating artificial intelligence and high-throughput …
Deep learning has made challenging phenotyping tasks achievable, and an image processing pipeline for high-throughput plant phenotyping has been developed. Big data management is crucial for crop improvement and plant breeding since it enables changes in fundamental plant traits.
Plant phenomics: High-throughput technology for accelerating …
Plant phenomics is a high-throughput path-breaking area that meets all the requirements for the collection of accurate, rapid and multi-faceted phenotypic data. Plant phenomics is an approach to envisage complex traits that are appropriate for selection, and provides relevant information as to why particular genotype can stand out …
Robotic Technologies for High-Throughput Plant …
A second group of indoor plant phenotyping robots sought to touch or probe plants or plant organs, in order to extend the ability of robotic phenotyping from plant's outward morphological traits to innate physiological and biochemical traits (Schulz and Baranska, 2007; Biskup et al., 2009).In this sense, the phenotyping robot was designed …
A High-Throughput Phenotyping Pipeline for Image Processing …
2000. 1000. Estimated mean (cm 2) 0. 01 0 2 0. ... throughput plant image processing and analysis, ... High-throughput plant phenotyping (HTPP) has become an emerging technique to study plant ...